STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC116Coiled-coil domain containing 116. (596 aa)    
Predicted Functional Partners:
GNL1
G protein nucleolar 1 (putative).
    
   0.698
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
    
   0.698
TEX13B
Testis expressed 13B.
  
     0.495
LSG1
Large 60S subunit nuclear export GTPase 1.
    
   0.480
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
    
   0.480
EFCAB5
EF-hand calcium binding domain 5.
      
 0.444
IFNAR2
Uncharacterized protein.
  
     0.442
TEX13A
Testis expressed 13A.
  
     0.433
LRRC52
Leucine rich repeat containing 52.
      
 0.402
TCOF1
Treacle ribosome biogenesis factor 1.
  
     0.400
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.