Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRANK1Tetratricopeptide repeat and ankyrin repeat containing 1. (2925 aa)    
Predicted Functional Partners:
RASGRP3
RAS guanyl releasing protein 3.
     
 0.802
PHC2
Polyhomeotic homolog 2.
    
   0.753
CCDC158
Coiled-coil domain containing 158.
    
   0.733
ADAR
Adenosine deaminase RNA specific.
   
    0.728
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.725
MYCBP2
MYC binding protein 2.
    
   0.709
KDM3A
Lysine demethylase 3A.
    
   0.696
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
    
 
 0.590
MAD1L1
Mitotic arrest deficient 1 like 1.
    
 0.537
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
    
 
 0.534
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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