STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRANK1Tetratricopeptide repeat and ankyrin repeat containing 1. (2925 aa)    
Predicted Functional Partners:
ADAR
Adenosine deaminase RNA specific.
   
    0.701
LMAN2L
Lectin, mannose binding 2 like.
      
 0.572
C1QTNF3
C1q domain-containing protein.
    
 0.566
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
     
 0.540
RASGRP3
RAS guanyl releasing protein 3.
      
 0.537
CAPN10
Calpain 10; Belongs to the peptidase C2 family.
    
 
 0.519
WDR18
WD repeat domain 18.
   
 0.495
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1; Belongs to the MHC class II family.
   
  0.451
RTP4
Receptor transporter protein 4.
   
  
 0.449
TEX10
Testis expressed 10.
    
 0.446
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.