STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB38RAB38, member RAS oncogene family. (211 aa)    
Predicted Functional Partners:
ANKRD27
Ankyrin repeat domain 27.
    
 
 0.844
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.715
GAK
Cyclin G associated kinase.
    
 
 0.696
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.679
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.657
DHX32
DEAH-box helicase 32 (putative).
   
  
 0.574
WFIKKN1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
      
 0.567
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.541
FNDC5
Fibronectin type III domain containing 5.
      
 0.538
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
      
 0.538
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (14%) [HD]