CAMTA2 protein (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CAMTA2

Calmodulin binding transcription activator 2. (1240 aa)

Predicted Functional Partners:

PSME3IP1

0.757

GRK5

0.572

RIMS2

0.434

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAMTA2	GRK5	ENSANAP00000028717	ENSANAP00000039689	Calmodulin binding transcription activator 2.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.572
CAMTA2	PSME3IP1	ENSANAP00000028717	ENSANAP00000007491	Calmodulin binding transcription activator 2.	Family with sequence similarity 192 member A.	0.757
CAMTA2	RIMS2	ENSANAP00000028717	ENSANAP00000003316	Calmodulin binding transcription activator 2.	Regulating synaptic membrane exocytosis 2.	0.434
GRK5	CAMTA2	ENSANAP00000039689	ENSANAP00000028717	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Calmodulin binding transcription activator 2.	0.572
PSME3IP1	CAMTA2	ENSANAP00000007491	ENSANAP00000028717	Family with sequence similarity 192 member A.	Calmodulin binding transcription activator 2.	0.757
RIMS2	CAMTA2	ENSANAP00000003316	ENSANAP00000028717	Regulating synaptic membrane exocytosis 2.	Calmodulin binding transcription activator 2.	0.434