Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLM | FANCM | ENSANAP00000042251 | ENSANAP00000014352 | BLM RecQ like helicase. | FA complementation group M. | 0.999 |
BLM | FBH1 | ENSANAP00000042251 | ENSANAP00000029353 | BLM RecQ like helicase. | F-box DNA helicase 1. | 0.943 |
BLM | PCNA | ENSANAP00000042251 | ENSANAP00000040255 | BLM RecQ like helicase. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.863 |
BLM | RAD18 | ENSANAP00000042251 | ENSANAP00000031244 | BLM RecQ like helicase. | RAD18 E3 ubiquitin protein ligase. | 0.847 |
BLM | RAD51 | ENSANAP00000042251 | ENSANAP00000041855 | BLM RecQ like helicase. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.977 |
BLM | RAD52 | ENSANAP00000042251 | ENSANAP00000012017 | BLM RecQ like helicase. | RAD52 homolog, DNA repair protein. | 0.960 |
BLM | RECQL5 | ENSANAP00000042251 | ENSANAP00000017420 | BLM RecQ like helicase. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.612 |
BLM | WRN | ENSANAP00000042251 | ENSANAP00000030110 | BLM RecQ like helicase. | WRN RecQ like helicase. | 0.675 |
BLM | XRCC3 | ENSANAP00000042251 | ENSANAP00000021719 | BLM RecQ like helicase. | DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. | 0.961 |
FANCM | BLM | ENSANAP00000014352 | ENSANAP00000042251 | FA complementation group M. | BLM RecQ like helicase. | 0.999 |
FANCM | FBH1 | ENSANAP00000014352 | ENSANAP00000029353 | FA complementation group M. | F-box DNA helicase 1. | 0.992 |
FANCM | PCNA | ENSANAP00000014352 | ENSANAP00000040255 | FA complementation group M. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.993 |
FANCM | RAD18 | ENSANAP00000014352 | ENSANAP00000031244 | FA complementation group M. | RAD18 E3 ubiquitin protein ligase. | 0.941 |
FANCM | RAD51 | ENSANAP00000014352 | ENSANAP00000041855 | FA complementation group M. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.955 |
FANCM | RAD52 | ENSANAP00000014352 | ENSANAP00000012017 | FA complementation group M. | RAD52 homolog, DNA repair protein. | 0.994 |
FANCM | RECQL4 | ENSANAP00000014352 | ENSANAP00000013180 | FA complementation group M. | RecQ like helicase 4. | 0.999 |
FANCM | RECQL5 | ENSANAP00000014352 | ENSANAP00000017420 | FA complementation group M. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.998 |
FANCM | WRN | ENSANAP00000014352 | ENSANAP00000030110 | FA complementation group M. | WRN RecQ like helicase. | 0.999 |
FANCM | XRCC3 | ENSANAP00000014352 | ENSANAP00000021719 | FA complementation group M. | DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. | 0.933 |
FBH1 | BLM | ENSANAP00000029353 | ENSANAP00000042251 | F-box DNA helicase 1. | BLM RecQ like helicase. | 0.943 |
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