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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94123.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
paaK
KEGG: cthe:Chro_2835 phenylacetate-CoA ligase.
  
 
 0.911
gatA
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: ddn:DND132_3343 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.900
APA96941.1
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: npp:PP1Y_AT18993 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.900
APA97970.1
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: rhl:LPU83_0206 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.900
APA98245.1
Amidase; Belongs to the amidase family; KEGG: psim:KR76_04415 amidase.
    
  0.900
APA98671.1
Amidase; Specifically catalyzes the hydrolysis of 6-aminohexanoic acid cyclic dimer (1,8-diazacyclotetradecane-2,9-dione) to form the linear dimer 6-aminohexanoyl-6-aminohexanoic acid. Is inactive on 6-aminohexanoic acid oligomers (degree of polymerization 2 to 6), various other cyclic amides, cyclic diamides, linear amides, oligopeptides, and casein. Allows the bacterium to grow on a medium containing 6-aminohexanoic acid cyclic dimer as the sole carbon and nitrogen sources; Belongs to the amidase family; KEGG: ank:AnaeK_3007 amidase.
    
  0.900
APA98951.1
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: kse:Ksed_09820 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.900
APA98986.1
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: bae:BATR1942_12175 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.900
APA99013.1
Amidase; Belongs to the amidase family; KEGG: nbr:O3I_007665 amidase.
    
  0.900
APA99346.1
Hypothetical protein.
     
  0.900
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (32%) [HD]
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