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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94159.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
APA94160.1
Hypothetical protein.
 
     0.792
APA95613.1
Hypothetical protein.
  
     0.684
APA95468.1
Hypothetical protein.
 
     0.682
miaB
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine; In the N-terminal sectio; belongs to the methylthiotransferase family. MiaB subfamily; Contains 1 MTTase N-terminal domain; Contains 1 TRAM domain; KEGG: mav:MAV_3625 tRNA-2-methylthio-N6-dimethylallyladenosine synthase.
  
     0.678
APA97378.1
Epstein-Barr nuclear antigen; Plays an essential role in replication and partitioning of viral genomic DNA during latent viral infection. During this phase, the circular double-stranded viral DNA undergoes replication once per cell cycle and is efficiently partitioned to the daughter cells. EBNA1 activates the initiation of viral DNA replication through binding to specific sites in the viral latent origin of replication, oriP. Additionally, it governs the segregation of viral episomes by mediating their attachment to host cell metaphase chromosomes. Also activates the transcription of [...]
  
     0.670
APA98781.1
Hypothetical protein.
  
     0.668
APA96196.1
Hypothetical protein.
  
    0.648
APA94795.1
Hypothetical protein.
  
     0.637
APB00159.1
Hypothetical protein.
  
     0.630
APA95190.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.