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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94208.1Hypothetical protein. (539 aa)    
Predicted Functional Partners:
ccsB
Cytochrome c bioproteinis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment; Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
 
  
 0.994
APA94209.1
Hypothetical protein.
 
  
 0.994
APA94210.1
Thiol:disulfide interchange protein TlpA; Involved in cytochrome aa3 assembly. Belongs to the thioredoxin family; Contains 1 thioredoxin domain.
 
  
 0.982
APA94211.1
Platelet binding protein GspB; Plays a role in virulence and host-pathogen interactions. Mediates binding to human platelets via interaction with the human cell surface glycoprotein GP1BA; Belongs to the SraP family.
 
    0.923
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily; KEGG: nno:NONO_c70200 glutamate-1-semialdehyde 2,1-aminomutase.
  
  
 0.887
APA94222.1
Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family; KEGG: nfa:nfa51680 uroporphyrinogen III methyltransferase.
 
    0.850
APA97361.1
Contains 2 cytochrome c domains.
 
  
 0.810
APA94184.1
Hypothetical protein.
  
  
 0.808
APA94969.1
Component of the menaquinol-cytochrome c reductase complex; Belongs to the cytochrome b family.
  
   
 0.777
APA95562.1
Component of the menaquinol-cytochrome c reductase complex; Belongs to the cytochrome b family.
  
   
 0.760
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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