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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94349.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
APA95555.1
Hypothetical protein.
  
     0.638
APA94350.1
Hypothetical protein.
       0.572
APA97434.1
Hypothetical protein.
  
     0.564
APA98964.1
Hypothetical protein.
  
     0.510
APA95120.1
Hypothetical protein.
  
     0.495
APA95091.1
Hypothetical protein.
  
     0.483
alg5
KEGG: sma:SAV_4549 dolichyl-phosphate beta-glucosyltransferase.
  
     0.482
sprC
Glutamyl endopeptidase; Preferentially cleaves peptide bonds on the carboxyl- terminal side of glutamate. Belongs to the peptidase S1 family; KEGG: aoi:AORI_3354 streptogrisin C; Serine endopeptidases.
  
     0.469
APA96133.1
Hypothetical protein.
  
   
 0.469
APA97681.1
Hypothetical protein.
  
     0.467
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.