Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APA94422.1 | APA95271.1 | NS506_00338 | NS506_01198 | Uncharacterized protein; Belongs to the CdaR family. | Hypothetical protein. | 0.500 |
APA94422.1 | APA95973.1 | NS506_00338 | NS506_01906 | Uncharacterized protein; Belongs to the CdaR family. | Uncharacterized protein; Cell membrane; Membrane; Transmembrane; Transmembrane helix. | 0.419 |
APA94422.1 | APA98313.1 | NS506_00338 | NS506_04265 | Uncharacterized protein; Belongs to the CdaR family. | Hypothetical protein. | 0.512 |
APA94422.1 | APA98470.1 | NS506_00338 | NS506_04422 | Uncharacterized protein; Belongs to the CdaR family. | Hypothetical protein. | 0.403 |
APA94422.1 | APA99309.1 | NS506_00338 | NS506_05263 | Uncharacterized protein; Belongs to the CdaR family. | Hypothetical protein. | 0.408 |
APA94422.1 | APB00159.1 | NS506_00338 | NS506_06122 | Uncharacterized protein; Belongs to the CdaR family. | Hypothetical protein. | 0.446 |
APA94422.1 | aldA | NS506_00338 | NS506_00339 | Uncharacterized protein; Belongs to the CdaR family. | Lactaldehyde dehydrogenase; Catalyzes the conversion of 5-oxopentanoate (glutarate semialdehyde) to glutarate; Belongs to the aldehyde dehydrogenase family; KEGG: esc:Entcl_2233 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase. | 0.537 |
APA94422.1 | kduD | NS506_00338 | NS506_00340 | Uncharacterized protein; Belongs to the CdaR family. | 2-deoxy-D-gluconate 3-dehydrogenase; Catalyzes the degradation of 2,5-dichloro-2,5- cyclohexadiene-1,4-diol (2,5-DDOL) into 2,5-dichlorohydroquinone (2,5-DCHQ). LinX appears not to be involved in gamma-HCH degradation pathway. Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: yal:AT01_1159 2-deoxy-D-gluconate 3-dehydrogenase. | 0.602 |
APA95271.1 | APA94422.1 | NS506_01198 | NS506_00338 | Hypothetical protein. | Uncharacterized protein; Belongs to the CdaR family. | 0.500 |
APA95973.1 | APA94422.1 | NS506_01906 | NS506_00338 | Uncharacterized protein; Cell membrane; Membrane; Transmembrane; Transmembrane helix. | Uncharacterized protein; Belongs to the CdaR family. | 0.419 |
APA98313.1 | APA94422.1 | NS506_04265 | NS506_00338 | Hypothetical protein. | Uncharacterized protein; Belongs to the CdaR family. | 0.512 |
APA98313.1 | APA98470.1 | NS506_04265 | NS506_04422 | Hypothetical protein. | Hypothetical protein. | 0.491 |
APA98470.1 | APA94422.1 | NS506_04422 | NS506_00338 | Hypothetical protein. | Uncharacterized protein; Belongs to the CdaR family. | 0.403 |
APA98470.1 | APA98313.1 | NS506_04422 | NS506_04265 | Hypothetical protein. | Hypothetical protein. | 0.491 |
APA98470.1 | APB00159.1 | NS506_04422 | NS506_06122 | Hypothetical protein. | Hypothetical protein. | 0.403 |
APA99309.1 | APA94422.1 | NS506_05263 | NS506_00338 | Hypothetical protein. | Uncharacterized protein; Belongs to the CdaR family. | 0.408 |
APB00159.1 | APA94422.1 | NS506_06122 | NS506_00338 | Hypothetical protein. | Uncharacterized protein; Belongs to the CdaR family. | 0.446 |
APB00159.1 | APA98470.1 | NS506_06122 | NS506_04422 | Hypothetical protein. | Hypothetical protein. | 0.403 |
aldA | APA94422.1 | NS506_00339 | NS506_00338 | Lactaldehyde dehydrogenase; Catalyzes the conversion of 5-oxopentanoate (glutarate semialdehyde) to glutarate; Belongs to the aldehyde dehydrogenase family; KEGG: esc:Entcl_2233 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase. | Uncharacterized protein; Belongs to the CdaR family. | 0.537 |
aldA | kduD | NS506_00339 | NS506_00340 | Lactaldehyde dehydrogenase; Catalyzes the conversion of 5-oxopentanoate (glutarate semialdehyde) to glutarate; Belongs to the aldehyde dehydrogenase family; KEGG: esc:Entcl_2233 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase. | 2-deoxy-D-gluconate 3-dehydrogenase; Catalyzes the degradation of 2,5-dichloro-2,5- cyclohexadiene-1,4-diol (2,5-DDOL) into 2,5-dichlorohydroquinone (2,5-DCHQ). LinX appears not to be involved in gamma-HCH degradation pathway. Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: yal:AT01_1159 2-deoxy-D-gluconate 3-dehydrogenase. | 0.779 |
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