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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCRibonuclease VapC35; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (142 aa)    
Predicted Functional Partners:
APA94528.1
Hypothetical protein.
       0.774
APA94931.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
  
 0.651
APB00421.1
Hypothetical protein.
  
     0.502
APA94526.1
Hypothetical protein.
       0.500
APA94529.1
Hypothetical protein.
       0.499
APA94530.1
Hypothetical protein.
       0.499
APA94649.1
Hypothetical protein.
   
 
 0.447
APA98237.1
Hypothetical protein.
   
 
 0.447
APA99238.1
Hypothetical protein.
   
 
 0.447
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.