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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94555.1Putative ABC transporter permease protein; Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily; Contains 1 ABC transmembrane type-1 domain. (344 aa)    
Predicted Functional Partners:
APA94556.1
Trehalose transport system permease protein SugB; Part of the ABC transporter complex LpqY-SugA-SugB-SugC, which is highly specific for uptake of trehalose. Involved in the recycling of extracellular trehalose released from trehalose- containing molecules synthesized by M. tuberculosis. Trehalose uptake is essential for virulence. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain.
 
0.998
APA94554.1
Trehalose/maltose-binding protein MalE; Part of the ABC transporter complex MalEFGK involved in trehalose/maltose import. Binds maltose and trehalose; Belongs to the bacterial solute-binding protein 1 family.
 
 0.990
APA94544.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn- glycerol-3-phosphate importer (TC 3. A. 1. 1. 3) family; Contains 1 ABC transporter domain.
 
 
 0.984
afuC
Fe(3+)-transporting ATPase; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3. A. 1. 106) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; KEGG: ngl:RG1141_PA13390 iron(III) transport system ATP-binding protein.
 
 
 0.984
APA99353.1
Iron-chelate-transporting ATPase; Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3. A. 1. 2. 1) family; Contains 2 ABC transporter domains; KEGG: ykr:CH54_3169 iron complex transport system ATP-binding protein.
 
 
 0.983
APA95923.1
Hypothetical protein.
 
 
 0.956
APA94672.1
Sn-glycerol-3-phosphate-binding periplasmic protein; Sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system UgpACE; Belongs to the bacterial solute-binding protein 1 family.
 
 
 0.952
APA99352.1
Sn-glycerol-3-phosphate-binding periplasmic protein UgpB; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import; Belongs to the bacterial solute-binding protein 1 family.
 
 
 0.952
APA94628.1
Putative ABC transporter permease protein YesQ; Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily; Contains 1 ABC transmembrane type-1 domain.
 
 
 0.948
APA95925.1
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain.
 
 0.948
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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