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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94669.1L,D-transpeptidase; Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems. Is essential for virulence in a mouse model of acute infection; Contains 1 YkuD domain. (300 aa)    
Predicted Functional Partners:
APB00673.1
Hypothetical protein.
  
     0.564
APA95462.1
UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.518
APA94670.1
Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain.
       0.469
APA95690.1
Resuscitation-promoting factor Rpf2; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells; Belongs to the transglycosylase family. Rpf subfamily; Contains 1 G5 domain.
 
   
 0.462
APB01213.1
Uncharacterized protein; To M. tuberculosis Rv1312.
  
     0.462
arsA
KEGG: pbm:CL52_01750 arsenite-transporting ATPase.
  
     0.461
APA94671.1
Putative ABC transporter permease protein; Probably part of a binding-protein-dependent transport system PH1036/38/39. Probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily; Contains 1 ABC transmembrane type-1 domain.
       0.456
APA94473.1
Serine protease; Required for M. tuberculosis resistance to oxidative stress in addition to its role in resistance to acid, which is essential for virulence; Belongs to the peptidase S1C family; Contains 1 peptidase S1 domain.
 
   
 0.451
APA94459.1
Hypothetical protein.
  
     0.447
APA94462.1
Uncharacterized protein; May play a role in septum formation.
 
    0.442
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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