STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94731.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
glpQ
KEGG: mtuh:I917_27005 glycerophosphoryl diester phosphodiesterase; overlaps another CDS with the same product name.
  
   
 0.866
crgA
Cell division protein CrgA; Involved in cell division; Belongs to the CrgA family.
 
   
 0.791
APA94791.1
Hypothetical protein.
  
     0.762
APA95912.1
Uncharacterized protein.
  
     0.757
APA97646.1
Hypothetical protein.
  
     0.756
APB00633.1
Low molecular weight protein antigen.
  
     0.754
miaB
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine; In the N-terminal sectio; belongs to the methylthiotransferase family. MiaB subfamily; Contains 1 MTTase N-terminal domain; Contains 1 TRAM domain; KEGG: mav:MAV_3625 tRNA-2-methylthio-N6-dimethylallyladenosine synthase.
  
     0.752
APA99121.1
Activating signal cointegrator 1 complex subunit 2 like protein; Enhances NF-kappa-B, SRF and AP1 transactivation; Belongs to the ASCC2 family; Contains 1 CUE domain.
  
     0.747
APA94160.1
Hypothetical protein.
  
     0.740
APA95990.1
Anti-sigma-E factor RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
     0.738
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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