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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94820.1Uncharacterized protein; Belongs to the bacterial solute-binding protein 5 family. (555 aa)    
Predicted Functional Partners:
APA94824.1
Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain; overlaps another CDS with the same product name.
 
 
 0.959
APA94823.1
Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain; overlaps another CDS with the same product name.
 
 
 0.920
APA94822.1
Putative peptide import ATP-binding protein; Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily; Contains 1 ABC transporter domain.
 
  
 0.874
APA94819.1
Uncharacterized protein; Belongs to the bacterial solute-binding protein 5 family.
 
  
 
0.814
APA94821.1
Uncharacterized protein; Belongs to the bacterial solute-binding protein 5 family.
 
  
 
0.757
APA94818.1
Hypothetical protein.
       0.735
APA95449.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
 
 0.626
APA94982.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
 
 0.606
APA95450.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
 
 0.606
APA94466.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
 
 0.603
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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