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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94827.1Proline-rich receptor-like protein kinase PERK8; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family; Contains 1 protein kinase domain. (453 aa)    
Predicted Functional Partners:
tagA
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid; Belongs to the glycosyltransferase 26 family; KEGG: hba:Hbal_1784 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase.
 
  
 0.658
amiA
N-acetylmuramoyl-L-alanine amidase; Cell-wall hydrolase that hydrolyzes the amide bond between N-acetylmuramic acid and L-alanine in cell-wall glycopeptides. Is able to lyse whole mycobacteria, release peptidoglycan from the cell wall of M. luteus and M. smegmatis, and cleave N-acetylmuramoyl-L-alanyl-D-isoglutamine, releasing free N- acetylmuramic acid and dipeptide; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family; KEGG: nfa:nfa56640 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.604
APA94826.1
SH3 domain-containing protein; Contains 1 SH3 domain.
 
     0.596
APA96544.1
Hypothetical protein.
  
  
 0.580
APA99638.1
Lysostaphin; KEGG: har:HEAR2799 lysostaphin.
 
  
 0.550
APA95080.1
Hypothetical protein.
 
     0.476
APA99589.1
Glycine-rich protein DOT1; Involved in leaf vasculature patterning.
 
  
 0.456
APA95089.1
Hypothetical protein.
 
  
 0.452
APA94936.1
Hypothetical protein.
 
     0.426
APB00706.1
Uncharacterized protein.
 
     0.422
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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