STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA94914.1O-antigen export system permease protein RfbD; May form an ATP-driven O-antigen export apparatus, in association with RfbE. Belongs to the ABC-2 integral membrane protein family; Contains 1 ABC transmembrane type-2 domain. (277 aa)    
Predicted Functional Partners:
APA94913.1
ABC transporter protein AbcA; Influences the expression of the surface array protein gene (vapA). May have both regulatory and transport activities. Belongs to the ABC transporter superfamily; Contains 1 ABC transporter domain.
 
 
 0.999
APA94912.1
Rhamnopyranosyl-N-acetylglucosaminyl-diphospho- decaprenol beta-1,3/1,4-galactofuranosyltransferase; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. It catalyzes the transfer of the first galactofuranosyl (Galf) unit from UDP- galactofuranosyl (UDP-Galf) onto the rhamnosyl-GlcNAc- pyrophosphoryl-undecaprenyl (Rha-GlcNAc-PP-C55) acceptor through a beta-D-(1->5) or a beta-D-(1->6) galactofuranosyltransferase activitie, yielding galactofuranosyl-rhamnosyl-GlcNAc- [...]
 
  
 0.993
APA94915.1
Bacterial proteasome activator; Interacts with the core proteasome alpha-subunit (PrcA) through its C-terminal hydrophobic-tyrosine-X motif (HbYX motif). Interaction of Bpa with the proteasome stimulates proteosomal peptidase and casein degradation activity, which suggests Bpa could play a role in the removal of non-native or damaged proteins by influencing the conformation of the proteasome complex upon interaction; Belongs to the Bpa family.
     
 0.830
wbbL
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase; Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the decaprenyl-pyrophosphoryl-GlcNAc (C50-PP-GlcNAc), yielding rhamnosyl-decaprenyl-pyrophosphoryl-GlcNAc (Rha-C50-PP-GlcNAc) (By similarity); Belongs to the glycosyltransferase 2 family; KEGG: cef:CE0755 N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
  
 0.790
APA96544.1
Hypothetical protein.
 
  
 0.777
glf
UDP-galactopyranose mutase; Catalyzes the interconversion through a 2-keto intermediate of uridine diphosphogalactopyranose (UDP-GalP) into uridine diphosphogalactofuranose (UDP-GalF) which is a key building block for cell wall construction in Mycobacterium tuberculosis; Belongs to the UDP-galactopyranose/dTDP-fucopyranose mutase family; KEGG: nno:NONO_c01380 UDP-galactopyranose mutase.
 
  
 0.749
tagA
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid; Belongs to the glycosyltransferase 26 family; KEGG: hba:Hbal_1784 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase.
  
  
 0.731
APA94858.1
Glycosyltransferase family 2 protein; Involved in the polymerization of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacteria cell wall, through successively beta-D-(1->5) and beta-D-(1->6)- galactofuranosyltransferases activities. It transfers the galactofuranosyl (Galf) unit from UDP-galactofuranosyl (UDP-Galf) onto the galactofuranosyl-rhamnosyl-GlcNAc-pyrophosphoryl- undecaprenyl (Galf-Rha-GlcNAc-PP-C55), yielding polygalactofuranosyl-rhamnosyl-GlcNAc-pyrophosphoryl- undecaprenyl ((Galf)x-Rha-GlcNAc-PP-C5 [...]
 
  
 0.723
APA94907.1
Glycosyltransferase; Involved in the polymerization of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacteria cell wall, through successively beta-D-(1->5) and beta-D-(1->6)- galactofuranosyltransferases activities. It transfers the galactofuranosyl (Galf) unit from UDP-galactofuranosyl (UDP-Galf) onto the galactofuranosyl-rhamnosyl-GlcNAc-pyrophosphoryl- undecaprenyl (Galf-Rha-GlcNAc-PP-C55), yielding polygalactofuranosyl-rhamnosyl-GlcNAc-pyrophosphoryl- undecaprenyl ((Galf)x-Rha-GlcNAc-PP-C55) (By similarity [...]
 
  
 0.687
APA94888.1
Uncharacterized protein; Belongs to the GtrA family.
 
  
 0.640
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (18%) [HD]
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