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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAMonosaccharide-transporting ATPase; Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily; Contains 2 ABC transporter domains; KEGG: ype:YPO0958 ribose transport system ATP-binding protein. (362 aa)    
Predicted Functional Partners:
APA94982.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
  
 0.987
APA96276.1
Part of the ABC transporter complex GsiABCD involved in glutathione import. Responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily. Glutathione importer (TC 3. A. 1. 5. 11) family; Contains 2 ABC transporter domains.
 
 
 0.935
APA94983.1
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3. A. 1. 122) family; Contains 1 ABC transporter domain.
  
0.913
APA94984.1
Uncharacterized protein; To bacterial alkanal monooxygenase alpha and beta chains.
  
    0.880
APA94466.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
  
 0.871
APA96275.1
Putative peptide transport system permease protein; Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain.
 
  
 0.870
APA95450.1
Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.
 
  
 0.866
APA94823.1
Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain; overlaps another CDS with the same product name.
 
  
 0.855
APA94979.1
Putative amino-acid ABC transporter permease protein PatM; Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily; Contains 1 ABC transmembrane type-1 domain.
  
 0.853
APA94465.1
Putative D,D-dipeptide transport ATP-binding protein DdpD; Part of the ABC transporter complex DdpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily; Contains 1 ABC transporter domain.
 
  
 0.842
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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