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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95016.1ESX-1 secretion-associated protein EspI. (604 aa)    
Predicted Functional Partners:
APB00346.1
Hypothetical protein.
  
     0.548
APA95912.1
Uncharacterized protein.
  
     0.530
APB01790.1
Uncharacterized protein.
  
  
 0.520
APB00101.1
Hypothetical protein.
  
 
 0.517
APB00558.1
Hypothetical protein.
  
 
 0.517
APB00568.1
Hypothetical protein.
  
     0.512
APA95867.1
Hypothetical protein.
  
     0.508
APA99494.1
Hypothetical protein.
  
     0.507
APA98412.1
Hypothetical protein.
  
     0.494
APB01400.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.