STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95027.1Uncharacterized protein; Cell membrane; Membrane; Plasmid; Transmembrane; Transmembrane helix. (394 aa)    
Predicted Functional Partners:
APA95028.1
Hypothetical protein.
       0.553
APA95026.1
Hypothetical protein.
       0.550
APA95337.1
Hypothetical protein.
  
     0.508
APA95650.1
Hypothetical protein.
  
     0.480
APA96814.1
Hypothetical protein.
  
     0.477
APB01404.1
KEGG: nno:NONO_c37230 acetyl-CoA C-acetyltransferase.
  
     0.474
APA98056.1
Hypothetical protein.
 
     0.449
APA97539.1
Hypothetical protein.
  
     0.408
alg5
KEGG: sma:SAV_4549 dolichyl-phosphate beta-glucosyltransferase.
  
     0.404
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.