STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95028.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
APA94102.1
Uncharacterized protein.
  
     0.661
APB01871.1
Uncharacterized protein.
  
     0.661
APB00294.1
Uncharacterized protein.
  
     0.610
APA97443.1
Uncharacterized protein.
  
     0.587
APA95027.1
Uncharacterized protein; Cell membrane; Membrane; Plasmid; Transmembrane; Transmembrane helix.
       0.553
APA95141.1
Hypothetical protein.
  
     0.546
APB01490.1
ABC transporter ATP-binding/permease protein; Involved in the translocation of an unknown substrate across the membrane. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation. Required for virulence; In the central sectio; belongs to the ABC transporter superfamily; In the C-terminal sectio; belongs to the ABC-2 integral membrane protein family; Contains 1 ABC transmembrane type-2 domain; Contains 1 ABC transporter domain; Contains 2 FHA domains.
  
     0.537
APA95108.1
Hypothetical protein.
 
     0.528
APB01153.1
Hypothetical protein.
  
     0.486
APA99854.1
Cutinase; KEGG: cter:A606_03065 cutinase.
  
     0.471
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.