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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95046.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
APA95047.1
Putative MFS-type transporter; Belongs to the major facilitator superfamily.
 
     0.588
APA95667.1
Cyclic-guanylate-specific phosphodiesterase; Contains 1 EAL domain; Contains 1 GAF domain; Contains 1 GGDEF domain; KEGG: eco:b1285 cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.581
APA95665.1
Uncharacterized protein.
  
  
 0.580
APA99381.1
Hypothetical protein.
  
     0.579
APB00873.1
Hypothetical protein.
  
     0.484
APB01170.1
HTH-type transcriptional regulator TcmR; Represses transcription of the divergently oriented tcmR and tcmA (tetracenomycin C resistance and export) genes by binding to an intergenic operator region. This binding is inhibited by tetracenomycin C; Contains 1 HTH tetR-type DNA-binding domain.
  
     0.469
APA99540.1
Hypothetical protein.
  
     0.426
APB01727.1
Global regulatory protein for secondary metabolite formation. Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 NB-ARC domain; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 3 TPR repeats.
  
  
 0.416
APB00145.1
Hypothetical protein.
  
     0.405
APB01883.1
KEGG: rha:RHA1_ro00755 non-specific serine/threonine protein kinase.
  
  
 0.402
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (54%) [HD]
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