STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glxKBelongs to the glycerate kinase type-1 family; KEGG: epr:EPYR_03079 glycerate kinase. (371 aa)    
Predicted Functional Partners:
APA98334.1
Belongs to the glycerate kinase type-1 family; KEGG: eco:b0514 glycerate kinase.
  
  
 
0.907
pgaM
Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.906
APA94504.1
Aldehyde dehydrogenase (NAD(+)); 2-hydroxymuconic acid semialdehyde can be converted to 2-hydroxypent-2,4-dienoate either directly by the action of 2- hydroxymuconic semialdehyde hydrolase (HMSH) or by the action of three sequential enzymes, the first of which is HMSD. Belongs to the aldehyde dehydrogenase family; KEGG: mtu:Rv0768 aldehyde dehydrogenase (NAD+).
   
 
 0.903
APA95114.1
Belongs to the aldehyde dehydrogenase family; KEGG: nfa:nfa54770 aldehyde dehydrogenase (NAD+).
   
 
 0.903
APB00727.1
KEGG: hba:Hbal_3182 probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
     
 0.903
APB01328.1
Belongs to the aldehyde dehydrogenase family; KEGG: cmq:B840_11350 aldehyde dehydrogenase; With NAD(+) or NADP(+) as acceptor.
   
 
 0.903
APA95081.1
Hypothetical protein.
       0.558
APA99478.1
Alpha-mannosidase; Belongs to the glycosyl hydrolase 38 family; KEGG: mab:MAB_4227c alpha-mannosidase.
  
 
 0.556
APA98992.1
Belongs to the GntP permease family.
 
  
 0.519
tadA-2
tRNA(adenine(34)) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.464
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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