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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95108.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine(46)-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.973
APA95107.1
Transports trehalose monomycolate (TMM) across the inner membrane. Could also be part of a heme-iron acquisition system; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family. MmpL subfamily.
  
  
 0.802
APA94871.1
Hypothetical protein.
 
   
 0.749
aftB
Terminal beta-(1->2)-arabinofuranosyltransferase; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) to the arabinan domain to form terminal beta-(1->2)-linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids; Belongs to the AftB family; KEGG: ncy:NOCYR_0136 arabi [...]
  
   
 0.736
APA95091.1
Hypothetical protein.
 
   
 0.686
aftC
Arabinofuranan 3-O-arabinosyltransferase; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the addition of arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C- 3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG; Belongs to the glycosyltransferase 87 family; KEGG: nfa:nfa37340 arabinofuranan 3-O-arabinosyltransferase.
  
     0.683
APA94697.1
Hypothetical protein.
  
 
 
 0.680
embC
Putative arabinosyltransferase B; Arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan. Belongs to the emb family; KEGG: nno:NONO_c01550 arabinosyltransferase C; Pentosyltransferases.
 
   
 0.666
APA96839.1
Putative arabinosyltransferase B; Arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan. Belongs to the emb family; KEGG: ncy:NOCYR_0151 arabinosyltransferase C; Pentosyltransferases.
 
   
 0.663
APA97431.1
Putative arabinosyltransferase; Arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan. Belongs to the emb family; KEGG: ncy:NOCYR_1889 arabinosyltransferase C; Pentosyltransferases.
 
   
 0.663
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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