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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95383.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
APA95384.1
Hypothetical protein.
       0.628
APA95386.1
Hypothetical protein.
  
 
 0.547
APA95385.1
Hypothetical protein.
       0.454
APA95381.1
3-oxocholest-4-en-26-oate--CoA ligase; Involved in the degradation of the side chains of C-24 branched-chain sterols. Catalyzes the ATP-dependent CoA thioesterification of the sterol 3-oxocholest-4-en-26-oate to yield 3-oxocholest-4-en-26-oyl-CoA. It can also use beta- sitosterol, campesterol and 3beta-hydroxy-5-cholesten-26-oate; Belongs to the ATP-dependent AMP-binding enzyme family; KEGG: pdx:Psed_2922 fatty-acyl-CoA synthase; Acid--thiol ligases.
  
    0.445
APA95382.1
Long-chain-fatty-acid--CoA/3-oxocholest-4-en-26- oate--CoA ligase; Catalyzes the activation of long-chain fatty acids as acyl-coenzyme A (acyl-CoA), which are then transferred to the multifunctional polyketide synthase (PKS) type III for further chain extension. Also involved in the degradation of cholesterol via the degradation of the side chains of C-24 branched-chain sterols. Catalyzes the ATP-dependent CoA thioesterification of the sterol 3-oxocholest-4-en-26-oate to yield 3-oxocholest-4-en-26- oyl-CoA; Belongs to the ATP-dependent AMP-binding enzyme family; KEGG: rha:RHA1_ro04675 [...]
  
    0.445
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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