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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydABelongs to the cytochrome ubiquinol oxidase subunit 1 family; KEGG: dpr:Despr_0567 cytochrome d ubiquinol oxidase subunit I; With oxygen as acceptor. (490 aa)    
Predicted Functional Partners:
cydB
Belongs to the cytochrome ubiquinol oxidase subunit 2 family; KEGG: nno:NONO_c06110 cytochrome d ubiquinol oxidase subunit II; With oxygen as acceptor.
 0.999
APA95460.1
Transport ATP-binding protein AarD; Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system (By similarity); Belongs to the ABC transporter superfamily; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain.
 
  
 0.994
APA95461.1
Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3. A. 1. 201) subfamily; Contains 2 ABC transmembrane type-1 domains; Contains 2 ABC transporter domains.
 
  
 0.990
sdhA
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily; KEGG: nno:NONO_c75630 succinate dehydrogenase / fumarate reductase, flavoprotein subunit.
     
 0.641
APA95816.1
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily; KEGG: red:roselon_01721 succinate dehydrogenase / fumarate reductase, flavoprotein subunit; overlaps another CDS with the same product name.
     
 0.641
APB00856.1
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily; KEGG: fra:Francci3_3466 succinate dehydrogenase / fumarate reductase, flavoprotein subunit.
     
 0.641
APB01370.1
Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily; KEGG: nno:NONO_c11120 succinate dehydrogenase / fumarate reductase, flavoprotein subunit; overlaps another CDS with the same product name.
     
 0.641
sdhC
Membrane-anchoring subunit of succinate dehydrogenase 2 (Sdh2). Sdh2 may catalyze the two-electron oxidation of succinate to fumarate with a corresponding reduction of quinone to quinol under low oxygen conditions, when the primary aerobic succinate dehydrogenase (Sdh1) is inhibited. Sdh2 seems to be the generator of the proton motive force (PMF) under hypoxia; Belongs to the cytochrome b560 family.
     
 0.592
sdhB
Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family; Contains 1 2Fe-2S ferredoxin-type domain; Contains 1 4Fe-4S ferredoxin-type domain; KEGG: nfa:nfa56030 succinate dehydrogenase / fumarate reductase, iron-sulfur subunit.
     
 0.582
APA95815.1
Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family; Contains 1 2Fe-2S ferredoxin-type domain; Contains 1 4Fe-4S ferredoxin-type domain; KEGG: mtu:Rv0247c succinate dehydrogenase / fumarate reductase, iron-sulfur subunit; overlaps another CDS with the same product name.
     
 0.582
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (52%) [HD]
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