STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95508.1Uncharacterized protein; Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family. (488 aa)    
Predicted Functional Partners:
APA94510.1
Uncharacterized protein.
  
    0.757
APA95486.1
Uncharacterized protein.
  
    0.757
APA97756.1
Uncharacterized protein; To M. tuberculosis Rv3776.
  
    0.753
APA95700.1
Uncharacterized protein; To M. tuberculosis Rv3776.
  
    0.750
APA96655.1
Uncharacterized protein; To M. tuberculosis Rv3776.
  
    0.725
APA95512.1
Putative hemin transport system permease protein HrtB; Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the ABC-4 integral membrane protein family. HrtB subfamily.
  
 
 0.621
APB01479.1
Proline-rich receptor-like protein kinase PERK2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family; Contains 1 protein kinase domain.
  
 
 0.581
APA95509.1
Putative uncharacterized protein YchG.
       0.545
APA95511.1
Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3. A. 1. 24) family; Contains 1 ABC transporter domain.
  
 
 0.459
APA96105.1
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner; Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3. A. 1. 125) family; Contains 1 ABC transporter domain.
  
 
 0.459
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.