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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atzFAllophanate hydrolase; Belongs to the amidase family; KEGG: mab:MAB_1558c allophanate hydrolase. (535 aa)    
Predicted Functional Partners:
APA95527.1
Urea carboxylase; Involved in uracil catabolism. Hydrolysis of urea to ammonia and CO(2); Belongs to the DUR1,2 family; Contains 1 ATP-grasp domain; Contains 1 biotin carboxylation domain; Contains 1 biotinyl-binding domain; KEGG: spe:Spro_1419 urea carboxylase.
  
 0.995
APA97858.1
Acetyl-CoA carboxylase; This protein carries two functions: biotin carboxyl carrier protein and biotin carboxyltransferase; Contains 1 ATP-grasp domain; Contains 1 biotin carboxylation domain; Contains 1 biotinyl-binding domain; KEGG: msm:MSMEG_4716 acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
  
 0.994
APA95528.1
Hypothetical protein.
 
  
 0.963
APA95529.1
Hypothetical protein.
 
  
 0.963
rutB
Peroxyureidoacrylate/ureidoacrylate amidohydrolase; In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2; Belongs to the isochorismatase family. RutB subfamily; KEGG: pri:PRIO_2645 ureidoacrylate peracid hydrolase.
 
  
  0.918
APA97859.1
Allophanate hydrolase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: fri:FraEuI1c_3831 allophanate hydrolase.
  
  
 
0.904
ureC-2
Urease; Belongs to the urease family; Contains 1 urease domain; KEGG: msa:Mycsm_03281 urease subunit alpha; overlaps another CDS with the same product name.
     
  0.900
ureB
Urease; Belongs to the urease beta subunit family; KEGG: thi:THI_3579 urease subunit beta; overlaps another CDS with the same product name.
     
  0.900
ureA
Urease; In the N-terminal sectio; belongs to the urease gamma subunit family; In the C-terminal sectio; belongs to the urease beta subunit family; KEGG: heu:HPPN135_05405 urease subunit gamma/beta.
     
  0.900
gatB
Asparaginyl-tRNA synthase (glutamine-hydrolyzing); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 
 0.850
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (50%) [HD]
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