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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95542.1Putative deferrochelatase/peroxidase YfeX; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact; Belongs to the DyP-type peroxidase family. (365 aa)    
Predicted Functional Partners:
APA95541.1
Linocin-M18; Bacteriocin that has antimicrobial activity against a wide range of Gram-positive bacteria, including L. monocytogenes, B. cereus and S. aureus. May have a protease activity. Belongs to the peptidase U56 family.
 
   
 0.980
APA96385.1
Uncharacterized protein; Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9. A. 10. 1) family.
  
  
 0.945
tatB
Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
 
  
 0.721
APA99026.1
Putative lipoprotein.
  
  
 0.616
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
  
  
 0.609
APA95543.1
Hypothetical protein.
       0.601
APA94768.1
Hypothetical protein.
  
  
 0.598
APA98010.1
KEGG: nfa:nfa11760 cholesterol oxidase.
      
 0.572
APB00610.1
Haloacetate dehalogenase; Catalyzes the cleavage of the N-acyl linkage of the ceramides (Cers) to yield sphingosine (Sph) and free fatty acid at an optimal pH of 8-9. Also catalyzes the synthesis of Cers from Sph and fatty acid; Belongs to the neutral ceramidase family; KEGG: sall:SAZ_32535 haloacetate dehalogenase.
  
  
 0.559
APA97410.1
Laccase domain protein; Belongs to the LACC1 family; Belongs to the multicopper oxidase YfiH/RL5 family.
      
 0.475
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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