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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95552.1Transcriptional activator, which is essential for taurine-dependent expression of the tpa-tauR-xsc operon. Acts by binding to direct repeats in the promoter region; In the C-terminal sectio; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; Contains 1 HTH gntR-type DNA-binding domain. (466 aa)    
Predicted Functional Partners:
APA95553.1
Uncharacterized protein.
       0.780
APA95549.1
Hypothetical protein.
 
    0.688
APA95550.1
Hypothetical protein.
       0.625
APA95551.1
Hypothetical protein.
       0.625
pnbA
Para-nitrobenzyl esterase; Catalyzes hydrolysis of several beta-lactam antibiotic PNB esters to the corresponding free acid and PNB alcohol. Belongs to the type-B carboxylesterase/lipase family; KEGG: sesp:BN6_38580 para-nitrobenzyl esterase; Carboxylic ester hydrolases.
   
   0.568
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.