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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95771.1Cytokinin dehydrogenase; Belongs to the oxygen-dependent FAD-linked oxidoreductase family; Contains 1 FAD-binding PCMH-type domain; KEGG: pper:PRUPE_ppa024442mg cytokinin dehydrogenase. (606 aa)    
Predicted Functional Partners:
APA95772.1
Hypothetical protein.
       0.773
APA95770.1
Hypothetical protein.
 
     0.621
APB01749.1
Uncharacterized protein; KEGG: nmr:Nmar_1109 phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase; Acting on the aldehyde or oxo group of donors.
      0.596
plsB
Belongs to the GPAT/DAPAT family; KEGG: nbr:O3I_003480 glycerol-3-phosphate O-acyltransferase.
    
 0.512
APA94860.1
Decaprenyl-phosphate phosphoribosyltransferase; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5- phosphoribose (DPPR); Belongs to the UbiA prenyltransferase family; KEGG: nfa:nfa1790 decaprenyl-phosphate phosphoribosyltransferase.
    
 0.482
APA95773.1
Hypothetical protein.
       0.477
atpD
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.472
APB00696.1
The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity); Belongs to the ETF alpha-subunit/FixB family.
  
 
 0.470
APB00697.1
The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity); Belongs to the ETF beta-subunit/FixA family.
  
 
 0.470
ectD
Ectoine dioxygenase; Involved in the biosynthesis of ectoine ((S)-2-methyl- 1,4,5,6-tetrahydropyrimidine-4-carboxylic acid) which is a highly soluble organic osmolyte, called compatible solute, use to avoid excessive water efflux, plasmolysis, molecular crowding of the cytoplasm, and cessation of growth in high salinity environments. Catalyzes the 2-oxoglutarate-dependent selective hydroxylation of L-ectoine to yield (4S,5S)-5-hydroxyectoine (By similarity); Belongs to the PhyH family. EctD subfamily; KEGG: ncy:NOCYR_3186 ectoine hydroxylase; With 2-oxoglutarate as one donor, and incor [...]
   
 0.445
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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