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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA95962.1Hypothetical protein. (551 aa)    
Predicted Functional Partners:
APA95963.1
UPF0699 transmembrane protein YdbS; Belongs to the UPF0699 family.
 
  
 0.989
APA95964.1
Hypothetical protein.
 
     0.636
APA96013.1
Hypothetical protein.
  
  
 0.576
APA95661.1
Uncharacterized protein; To M. tuberculosis Rv1259.
       0.489
APB01643.1
Hypothetical protein.
  
     0.471
fbiC
FO synthase; Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO); In the N-terminal sectio; belongs to the radical SAM superfamily. CofG family; In the C-terminal sectio; belongs to the radical SAM superfamily. CofH family; KEGG: ncy:NOCYR_4499 FO synthase; Transferring alkyl or aryl groups, other than methyl groups.
 
     0.469
APA95583.1
Uncharacterized protein; Contains 1 cobW C-terminal domain.
 
    0.450
APB00159.1
Hypothetical protein.
  
     0.435
APA96452.1
Fatty acid synthase subunit beta; Fatty acid synthetase catalyzes the formation of long- chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. The beta subunit contains domains for: [acyl-carrier-protein] acetyltransferase and malonyltransferase, S-acyl fatty acid synthase thioesterase, enoyl-[acyl-carrier-protein] reductase, and 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase. Belongs to the fungal fatty acid synthetase subunit beta family; Contains 1 MaoC-like domain; KEGG: nno:NONO_c62310 fatty acid synthase, bacteria type; Transferring groups other than amino-acyl groups.
       0.420
dapC-2
Hypothetical protein.
       0.419
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.