close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96004.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
APA96003.1
Specifically methylates the guanosine in position 748 of 23S rRNA. Confers resistance to the macrolide antibiotic tylosine; Belongs to the methyltransferase superfamily. RlmA family; KEGG: nbr:O3I_035740 23S rRNA (guanine745-N1)-methyltransferase.
       0.828
tag
DNA-3-methyladenine glycosylase I; Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions; KEGG: nbr:O3I_035730 DNA-3-methyladenine glycosylase I.
     
 0.786
APA94481.1
Hypothetical protein.
  
     0.770
hrpA
RNA helicase; Antimicrobial protein with bacteriostatic activity against the Gram-negative bacterium E. coli, and very weak activity against the Gram-positive bacterium S. aureus. Lacks activity against the yeast C. albicans; KEGG: nbr:O3I_029800 ATP-dependent helicase HrpA.
  
     0.653
APA96006.1
Hypothetical protein.
       0.644
APB01142.1
Nucleoid-associated protein Lsr2; DNA-bridging protein that has both architectural and regulatory roles. Influences the organization of chromatin and gene expression by binding non-specifically to DNA, with a preference for AT-rich sequences, and bridging distant DNA segments (By similarity); Belongs to the Lsr2 family.
  
     0.479
APA95984.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.452
APB01790.1
Uncharacterized protein.
  
    0.442
APA94404.1
Nucleoid-associated protein Lsr2; DNA-bridging protein that has both architectural and regulatory roles. Influences the organization of chromatin and gene expression by binding non-specifically to DNA, with a preference for AT-rich sequences, and bridging distant DNA segments (By similarity); Belongs to the Lsr2 family.
  
     0.433
APA94462.1
Uncharacterized protein; May play a role in septum formation.
  
     0.431
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.