Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
APA96004.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
APA96003.1
Specifically methylates the guanosine in position 748 of 23S rRNA. Confers resistance to the macrolide antibiotic tylosine; Belongs to the methyltransferase superfamily. RlmA family; KEGG: nbr:O3I_035740 23S rRNA (guanine745-N1)-methyltransferase.
       0.827
APA94481.1
Hypothetical protein.
  
     0.770
tag
DNA-3-methyladenine glycosylase I; Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions; KEGG: nbr:O3I_035730 DNA-3-methyladenine glycosylase I.
     
 0.701
hrpA
RNA helicase; Antimicrobial protein with bacteriostatic activity against the Gram-negative bacterium E. coli, and very weak activity against the Gram-positive bacterium S. aureus. Lacks activity against the yeast C. albicans; KEGG: nbr:O3I_029800 ATP-dependent helicase HrpA.
  
     0.653
APA96006.1
Hypothetical protein.
       0.644
APB01142.1
Nucleoid-associated protein Lsr2; DNA-bridging protein that has both architectural and regulatory roles. Influences the organization of chromatin and gene expression by binding non-specifically to DNA, with a preference for AT-rich sequences, and bridging distant DNA segments (By similarity); Belongs to the Lsr2 family.
  
     0.479
APA95984.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.457
gpgS
Glucosyl-3-phosphoglycerate synthase; Involved in the biosynthesis of methylglucose lipopolysaccharides (MGLPs). Catalyzes the condensation of UDP- glucose and 3-phospho-glycerate (3-PGA) to yield glucosyl-3- phosphoglycerate (GPG). Although UDP-glucose is the natural donor sugar, GpgS can also use UDP-GalNAc, UDPGlcNAc, UDP-alpha-L- arabinose, UDP-Gal, UDP-Glc, UDP-alpha-Dglucuronic acid, and UDP- alpha-D-xylose as donor substrates; Belongs to the glycosyltransferase 2 family; KEGG: asd:AS9A_3352 glucosyl-3-phosphoglycerate synthase.
       0.457
APB01790.1
Uncharacterized protein.
  
    0.448
APA94404.1
Nucleoid-associated protein Lsr2; DNA-bridging protein that has both architectural and regulatory roles. Influences the organization of chromatin and gene expression by binding non-specifically to DNA, with a preference for AT-rich sequences, and bridging distant DNA segments (By similarity); Belongs to the Lsr2 family.
  
     0.433
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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