STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96129.1Protein p49; KEGG: mbo:Mb3021 null; Oxidoreductases. (493 aa)    
Predicted Functional Partners:
APA96130.1
Hypothetical protein.
       0.727
APA96128.1
Hypothetical protein.
       0.630
crtB
15-cis-phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield phytoene (By similarity); Belongs to the phytoene/squalene synthase family; KEGG: bmq:BMQ_0656 phytoene synthase.
  
  
 0.624
APA96127.1
Hypothetical protein.
       0.512
ydfG
Bifunctional enzyme acting on the peroxisomal beta- oxidation pathway for fatty acids; Belongs to the short-chain dehydrogenases/reductases (SDR) family; Contains 1 MaoC-like domain; KEGG: xpo:XPG1_1710 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase.
     
 0.498
APA99582.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: ret:RHE_PE00431 2-keto-3-deoxy-L-fuconate dehydrogenase; With NAD(+) or NADP(+) as acceptor.
     
 0.498
chlD
Magnesium chelatase; Involved in bacteriochlorophyll biosynthesi; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family; KEGG: nno:NONO_c55210 magnesium chelatase subunit D.
  
  
 0.494
yahK
Belongs to the zinc-containing alcohol dehydrogenase family; KEGG: nbr:O3I_039130 uncharacterized zinc-type alcohol dehydrogenase-like protein; Oxidoreductases.
      
 0.416
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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