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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96325.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
APA96326.1
Hypothetical protein.
       0.481
APA96327.1
Beta-Ala-His dipeptidase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily; KEGG: acs:100554161 beta-Ala-His dipeptidase.
  
    0.419
APA96328.1
KEGG: rba:RB12133 acetylornithine deacetylase.
  
    0.419
npdA
NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily; Contains 1 deacetylase sirtuin-type domain; KEGG: cai:Caci_7099 NAD-dependent deacetylase; In linear amides.
  
    0.417
APA97879.1
Contains 1 glutamine amidotransferase type-1 domain.
  
  
 0.416
APA96593.1
Putative HTH-type transcriptional regulator; The imp locus inhibits the extrachromosomal maintenance of the Streptomyces plasmid SLP1. Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.410
APA97336.1
Transcriptional repressor of the arabinose utilization genes. Also regulates its own expression. Binds to two sequences within the promoters of the araABDLMNPQ-abfA operon and the araE gene, and to one sequence in the araR promoter. Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.410
APA98264.1
Putative HTH-type transcriptional regulator; Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.410
APB00402.1
HTH-type transcriptional repressor PhnF; Represses the phnDCE operon, involved in the uptake of phosphate, under conditions of phosphate availability in the cell; Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.410
APB01531.1
Putative HTH-type transcriptional regulator; The imp locus inhibits the extrachromosomal maintenance of the Streptomyces plasmid SLP1. Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.410
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (52%) [HD]
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