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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96373.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
APB00300.1
6-methylsalicylic acid synthase; Contains 3 acyl carrier domains; KEGG: fre:Franean1_3611 6-methylsalicylic acid synthase.
  
 
 0.927
APB01626.1
Erythronolide synthase, modules 1 and; Contains 3 acyl carrier domains.
  
 
 0.849
APA96374.1
Hypothetical protein.
 
    
0.812
APA94873.1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA; Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively; Contains 2 acyl carrier domains.
  
 
 0.695
APA99368.1
Polyketide synthase PksJ; Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 5 acyl carrier domains.
  
 
 0.693
rplL-2
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
       0.642
gdh2
Glutamate dehydrogenase; Catalyzes the reversible conversion of L-glutamate to 2- oxoglutarate; Belongs to the Glu/Leu/Phe/Val dehydrogenases family; KEGG: nfa:nfa13060 glutamate dehydrogenase.
 
    0.639
APA96452.1
Fatty acid synthase subunit beta; Fatty acid synthetase catalyzes the formation of long- chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. The beta subunit contains domains for: [acyl-carrier-protein] acetyltransferase and malonyltransferase, S-acyl fatty acid synthase thioesterase, enoyl-[acyl-carrier-protein] reductase, and 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase. Belongs to the fungal fatty acid synthetase subunit beta family; Contains 1 MaoC-like domain; KEGG: nno:NONO_c62310 fatty acid synthase, bacteria type; Transferring groups other than amino-acyl groups.
  
 
 0.609
APB00297.1
Hypothetical protein.
  
 
 0.601
APB00299.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of 1,3,6,8- tetrahydroxynaphthalene (T4HN) into (+)-scytalone and 1,3,8- trihydroxynaphthalene into (-)-vermelone. This enzyme is the biochemical target of several commercially important fungicides which are used to prevent blast disease in rice plants. Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: mrd:Mrad2831_1938 3-oxoacyl-(acyl-carrier protein) reductase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.601
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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