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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96447.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
APB00106.1
Long-chain-fatty-acid--AMP ligase FadD32; Catalyzes the activation of long-chain fatty acids as acyl-adenylates (acyl-AMP), which are then transferred to the multifunctional polyketide synthase (PKS) for further chain extension; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.887
APA96448.1
Hypothetical protein.
  
  
 0.804
APB00105.1
KEGG: sen:SACE_4878 alkanesulfonate monooxygenase.
  
 
 0.776
APA94873.1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA; Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively; Contains 2 acyl carrier domains.
  
 
 0.726
APB01626.1
Erythronolide synthase, modules 1 and; Contains 3 acyl carrier domains.
  
 
 0.676
entF
Dimodular nonribosomal peptide synthase; Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 2 acyl carrier domains; KEGG: xcp:XCR_0420 enterobactin synthetase component F; Nucleotidyltransferases.
  
 
 0.644
gcaT
Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily; KEGG: dmi:Desmer_2111 glycine C-acetyltransferase.
  
 
 0.621
APA99368.1
Polyketide synthase PksJ; Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 5 acyl carrier domains.
  
 
 0.611
APA95407.1
Protein MbtH; Could be involved in mycobactin synthesis; To M. tuberculosis MbtH.
  
 
 0.584
APB01844.1
Protein MbtH; Could be involved in mycobactin synthesis; To M. tuberculosis MbtH.
  
 
 0.584
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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