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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xynAEndo-1,4-beta-xylanase; Contributes to hydrolyze hemicellulose, the major component of plant cell-walls. XLNA and XLNB seem to act sequentially on the substrate to yield xylobiose and xylose as carbon sources. Belongs to the glycosyl hydrolase 10 (cellulase F) family; Contains 1 GH10 (glycosyl hydrolase family 10) domain; Contains 1 ricin B-type lectin domain; KEGG: amd:AMED_5064 endo-1,4-beta-xylanase. (557 aa)    
Predicted Functional Partners:
APA95877.1
Spermatoproteinis-associated protein; May play a role in fertility regulation.
  
 
 0.917
APA95884.1
Uncharacterized protein; To C. elegans B0495. 5.
  
 
 0.917
APA95983.1
Endo-1,3-1,4-beta-glycanase ExsH; Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulates the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes a time-dependent change in its conformation or aggregation state; Belongs to the glycosyl hydrolase 16 family; Contains 1 GH16 (glycosyl hydrolase family 16) domain; Contains 3 hemolysin-type calcium-binding repeats; KEGG: sme:SM_b20932 null; Glycosidases, i. e. enzymes hydrolyzing O- and S-glycosyl [...]
 
   
 0.786
APA99412.1
KEGG: cpy:Cphy_3586 arabinogalactan endo-1,4-beta-galactosidase.
 
  
 0.735
bglX
Beta-glucosidases are one of a number of cellulolytic enzymes involved in the degradation of cellulosic biomass. Catalyzes the last step releasing glucose from the inhibitory cellobiose (By similarity); Belongs to the glycosyl hydrolase 3 family; Contains 1 PA14 domain; KEGG: nno:NONO_c29350 beta-glucosidase.
 
   
 0.585
APA95523.1
Hypothetical protein.
 
 
 0.543
APA96543.1
Hypothetical protein.
 
   
 0.539
tagA
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid; Belongs to the glycosyltransferase 26 family; KEGG: hba:Hbal_1784 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase.
  
  
 0.522
APA96544.1
Hypothetical protein.
  
  
 0.522
APA97799.1
Hypothetical protein.
 
 
 0.507
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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