STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96680.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
APA96681.1
Hypothetical protein.
 
     0.902
APA96679.1
Hypothetical protein.
       0.773
APB00615.1
Hypothetical protein.
  
     0.747
APB00310.1
Hypothetical protein; Belongs to the UPF0255 family.
  
     0.737
APA96667.1
Hypothetical protein.
  
     0.608
APA97067.1
Hypothetical protein.
  
     0.603
APA99195.1
Hypothetical protein.
  
     0.585
APB00552.1
Hypothetical protein.
  
     0.516
APA95942.1
Hypothetical protein.
  
     0.498
APA97068.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.