STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA96872.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
APA95560.1
Putative antitoxin component of a type II toxin- antitoxin (TA) module. Its cognate toxin would be HigB3; Contains 1 HTH cro/C1-type DNA-binding domain.
  
    0.463
APA98416.1
Prolyl aminopeptidase; KEGG: rav:AAT18_23930 proline iminopeptidase.
 
    0.463
APA96468.1
Hypothetical protein.
 
  
 0.454
APA95030.1
HTH-type transcriptional regulator BetI; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity); Contains 1 HTH tetR-type DNA-binding domain.
 
     0.417
APA99066.1
Hypothetical protein.
 
    0.417
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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