Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APA95030.1 | APA96872.1 | NS506_00956 | NS506_02812 | HTH-type transcriptional regulator BetI; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity); Contains 1 HTH tetR-type DNA-binding domain. | Hypothetical protein. | 0.417 |
APA95560.1 | APA96872.1 | NS506_01489 | NS506_02812 | Putative antitoxin component of a type II toxin- antitoxin (TA) module. Its cognate toxin would be HigB3; Contains 1 HTH cro/C1-type DNA-binding domain. | Hypothetical protein. | 0.463 |
APA96468.1 | APA96872.1 | NS506_02403 | NS506_02812 | Hypothetical protein. | Hypothetical protein. | 0.454 |
APA96872.1 | APA95030.1 | NS506_02812 | NS506_00956 | Hypothetical protein. | HTH-type transcriptional regulator BetI; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity); Contains 1 HTH tetR-type DNA-binding domain. | 0.417 |
APA96872.1 | APA95560.1 | NS506_02812 | NS506_01489 | Hypothetical protein. | Putative antitoxin component of a type II toxin- antitoxin (TA) module. Its cognate toxin would be HigB3; Contains 1 HTH cro/C1-type DNA-binding domain. | 0.463 |
APA96872.1 | APA96468.1 | NS506_02812 | NS506_02403 | Hypothetical protein. | Hypothetical protein. | 0.454 |
APA96872.1 | APA98416.1 | NS506_02812 | NS506_04368 | Hypothetical protein. | Prolyl aminopeptidase; KEGG: rav:AAT18_23930 proline iminopeptidase. | 0.463 |
APA96872.1 | APA99066.1 | NS506_02812 | NS506_05020 | Hypothetical protein. | Hypothetical protein. | 0.417 |
APA98416.1 | APA96872.1 | NS506_04368 | NS506_02812 | Prolyl aminopeptidase; KEGG: rav:AAT18_23930 proline iminopeptidase. | Hypothetical protein. | 0.463 |
APA99066.1 | APA96872.1 | NS506_05020 | NS506_02812 | Hypothetical protein. | Hypothetical protein. | 0.417 |