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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA97161.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
APA97162.1
Hypothetical protein.
       0.773
APA97158.1
Hypothetical protein.
 
     0.715
APA94541.1
Hypothetical protein.
 
     0.620
APA99432.1
Hypothetical protein.
  
     0.530
APA95707.1
Hypothetical protein.
  
     0.488
APA97163.1
Hypothetical protein.
       0.478
APA95705.1
Hypothetical protein.
  
     0.458
APA97164.1
Histidinol-phosphate transaminase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: nfa:nfa16320 histidinol-phosphate aminotransferase.
 
     0.457
APA97908.1
Hypothetical protein.
  
     0.456
APA94617.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.