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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aacAContains 1 N-acetyltransferase domain; KEGG: dgo:DGo_CA2521 aminoglycoside 6'-N-acetyltransferase. (245 aa)    
Predicted Functional Partners:
APA97193.1
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family; Contains 1 protein kinase domain; KEGG: rha:RHA1_ro11306 non-specific serine/threonine protein kinase.
       0.701
APB01630.1
L-lysine N6-monooxygenase MbtG; Flavoprotein monooxygenase required for N-hydroxylation of the two acylated lysine residues during mycobactin assembly, thus producing the hydroxamate groups necessary for iron sequestration. Is also able, but less efficiently, to hydroxylate L-lysine (non acylated) in vitro (By similarity); Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family.
  
  
 0.588
APA95549.1
Hypothetical protein.
      0.571
APA97191.1
Putative carboxypeptidase PM20D1.1; Belongs to the peptidase M20A family; KEGG: nbr:O3I_011185 carboxypeptidase PM20D1; Metallocarboxypeptidases.
 
     0.544
rnt1
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.538
APB00106.1
Long-chain-fatty-acid--AMP ligase FadD32; Catalyzes the activation of long-chain fatty acids as acyl-adenylates (acyl-AMP), which are then transferred to the multifunctional polyketide synthase (PKS) for further chain extension; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.505
APA97192.1
Hypothetical protein.
       0.472
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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