Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APA97346.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
APA99272.1
TetR is the repressor of the tetracycline resistance elemen; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites. Contains 1 HTH tetR-type DNA-binding domain.
  
   
 0.635
APA97347.1
Isovaleryl-CoA dehydrogenase; This enzyme is specific for acyl chain lengths of 4 to 16; Belongs to the acyl-CoA dehydrogenase family; KEGG: ppr:PBPRB1114 isovaleryl-CoA dehydrogenase.
 
     0.595
APA95667.1
Cyclic-guanylate-specific phosphodiesterase; Contains 1 EAL domain; Contains 1 GAF domain; Contains 1 GGDEF domain; KEGG: eco:b1285 cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.583
APA98852.1
Hypothetical protein.
  
 
   0.544
APA95665.1
Uncharacterized protein.
  
  
 0.525
APA97348.1
L-2,3-butanediol dehydrogenase; Catalyzes the reversible reduction of (S)-acetoin to (S,S)-butane-2,3-diol (L-BD) in the presence of NADH. To a lesser extent, can also catalyze the irreversible reduction of diacetyl to (S)-acetoin. Cannot oxidize meso-BD, D-BD, 2-butanol, 1,2- propanediol, ethanol, acetol, 1,2-butanediol, 1,3-butanediol, n- butanol, and n-propanol. Cannot reduce (R)-acetoin, acetol, dihydroxyacetone and 2,4-pentanedione; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: ebi:EbC_pEb17201130 meso-butanediol dehydrogenase / (S,S)-butanediol dehydrog [...]
       0.467
APA97142.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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