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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA97621.1Hypothetical protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (143 aa)    
Predicted Functional Partners:
APB01467.1
Hypothetical protein.
 
 
 
 0.790
mhpF
Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
  
 
 0.777
APB01864.1
Hypothetical protein.
 
     0.770
APA94666.1
Hypothetical protein.
  
     0.765
APA94095.1
Hypothetical protein.
 
     0.764
APA94096.1
Hypothetical protein.
 
     0.764
APB01865.1
Hypothetical protein.
 
     0.764
APA94757.1
Cutinase; KEGG: cter:A606_03065 cutinase.
  
     0.762
APB01112.1
Cutinase; May play a role in the control of cell motility and survival of macrophages (By similarity). Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape; Contains 1 DAD (diaphanous autoregulatory) domain; KEGG: cter:A606_03065 cutinase.
  
     0.758
APA97434.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.