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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA97712.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
APA97708.1
Putative membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family. MmpL subfamily.
       0.634
APA97709.1
Dehydrogenase/reductase SDR family member; Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.634
APA97710.1
Hypothetical protein.
       0.634
APA97711.1
Transcriptional regulatory protein EmbR; Positively regulates the transcription of the embCAB operon. Exhibits ATPase and GTPase activities (By similarity); Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 FHA domain; Contains 1 OmpR/PhoB-type DNA-binding domain.
       0.634
APA97707.1
Hypothetical protein.
       0.494
APA97717.1
Hypothetical protein.
       0.461
APA97713.1
Hypothetical protein.
       0.441
APA97714.1
NADPH:quinone reductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily; KEGG: gst:HW35_06215 NADPH2:quinone reductase.
       0.441
APA97715.1
2-polyprenyl-6-hydroxyphenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family; KEGG: oni:Osc7112_3696 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase.
       0.441
aba1
Zeaxanthin epoxidase; Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. Belongs to the 3-hydroxybenzoate 6-hydroxylase family; KEGG: tps:THAPSDRAFT_270370 zeaxanthin epoxidase.
       0.441
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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