Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APA94459.1 | APA95462.1 | NS506_00376 | NS506_01390 | Hypothetical protein. | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | 0.425 |
| APA94459.1 | APA96167.1 | NS506_00376 | NS506_02100 | Hypothetical protein. | Hypothetical protein. | 0.575 |
| APA94459.1 | APA97395.1 | NS506_00376 | NS506_03343 | Hypothetical protein. | Hypothetical protein. | 0.541 |
| APA94459.1 | APA97853.1 | NS506_00376 | NS506_03804 | Hypothetical protein. | L,D-transpeptidase; Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems. Is essential for virulence in a mouse model of acute infection; Contains 1 YkuD domain. | 0.538 |
| APA94459.1 | APA99989.1 | NS506_00376 | NS506_05953 | Hypothetical protein. | Hypothetical protein. | 0.492 |
| APA94459.1 | APB00673.1 | NS506_00376 | NS506_06642 | Hypothetical protein. | Hypothetical protein. | 0.696 |
| APA94459.1 | holA | NS506_00376 | NS506_06750 | Hypothetical protein. | KEGG: ckp:ckrop_1345 DNA polymerase III subunit delta. | 0.413 |
| APA95462.1 | APA94459.1 | NS506_01390 | NS506_00376 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.425 |
| APA95462.1 | APA96167.1 | NS506_01390 | NS506_02100 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.579 |
| APA95462.1 | APA97381.1 | NS506_01390 | NS506_03329 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | 3'-5' exoribonuclease; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.631 |
| APA95462.1 | APA97395.1 | NS506_01390 | NS506_03343 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.554 |
| APA95462.1 | APA97853.1 | NS506_01390 | NS506_03804 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | L,D-transpeptidase; Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems. Is essential for virulence in a mouse model of acute infection; Contains 1 YkuD domain. | 0.530 |
| APA95462.1 | APA99989.1 | NS506_01390 | NS506_05953 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.548 |
| APA95462.1 | APB00673.1 | NS506_01390 | NS506_06642 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.404 |
| APA95462.1 | holA | NS506_01390 | NS506_06750 | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | KEGG: ckp:ckrop_1345 DNA polymerase III subunit delta. | 0.597 |
| APA95553.1 | APA97853.1 | NS506_01482 | NS506_03804 | Uncharacterized protein. | L,D-transpeptidase; Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems. Is essential for virulence in a mouse model of acute infection; Contains 1 YkuD domain. | 0.497 |
| APA96167.1 | APA94459.1 | NS506_02100 | NS506_00376 | Hypothetical protein. | Hypothetical protein. | 0.575 |
| APA96167.1 | APA95462.1 | NS506_02100 | NS506_01390 | Hypothetical protein. | UPF0678 fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands. | 0.579 |
| APA96167.1 | APA97381.1 | NS506_02100 | NS506_03329 | Hypothetical protein. | 3'-5' exoribonuclease; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.738 |
| APA96167.1 | APA97395.1 | NS506_02100 | NS506_03343 | Hypothetical protein. | Hypothetical protein. | 0.771 |
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