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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98212.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
APA98213.1
Hypothetical protein.
       0.545
APA98214.1
Hypothetical protein.
       0.538
APA98215.1
Galactose oxidase; Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides; Contains 1 F5/8 type C domain; Contains 5 Kelch repeats; KEGG: bge:BC1002_6585 galactose oxidase.
       0.538
APA98216.1
Enoyl-CoA hydratase; Could possibly oxidize fatty acids using specific components; Belongs to the enoyl-CoA hydratase/isomerase family; KEGG: msm:MSMEG_5639 enoyl-CoA hydratase.
       0.509
APA98218.1
HTH-type transcriptional regulator MalT; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box): 5'-GGA[TG]GA-3'; Contains 1 HTH luxR-type DNA-binding domain.
  
  
 0.450
APA98217.1
Hypothetical protein.
       0.427
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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