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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98246.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
APB01503.1
Hypothetical protein; Belongs to the peptidase S8 family.
 
 
 0.534
APB01265.1
Hypothetical protein.
 
 
 0.487
APB01263.1
Hypothetical protein.
 
   0.476
APA95042.1
Hypothetical protein.
 
 
 0.469
APA98247.1
Lactate 2-monooxygenase; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family; Contains 1 FMN hydroxy acid dehydrogenase domain; KEGG: mav:MAV_3747 lactate 2-monooxygenase.
  
  
 0.422
APA96166.1
Phytochrome-like protein cph1; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the rcp1 response regulator. In the N-terminal sectio; belongs to the phytochrome family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: mac:MA0552 null; Phosphotransferases with a nitrogen [...]
 
   
 0.413
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.