Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APA98301.1 | APA98302.1 | NS506_04253 | NS506_04254 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Hypothetical protein. | 0.991 |
| APA98301.1 | APA98841.1 | NS506_04253 | NS506_04795 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine. Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters. Required for the maturation of all plastidic Fe-S proteins and, thus, essential for plant growth ; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: ncy:NOCYR_2674 cysteine desulfurase / selenocysteine lyase. | 0.975 |
| APA98301.1 | APB00676.1 | NS506_04253 | NS506_06645 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily; KEGG: psim:KR76_19405 cysteine desulfurase. | 0.997 |
| APA98301.1 | egtE | NS506_04253 | NS506_01657 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily. | 0.952 |
| APA98301.1 | iscS | NS506_04253 | NS506_00837 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Is essential for optimal growth; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: rha:RHA1_ro04117 cysteine desulfurase. | 0.958 |
| APA98301.1 | sufB | NS506_04253 | NS506_04249 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Belongs to the UPF0051 (ycf24) family; Contains 1 DOD-type homing endonuclease domain; overlaps another CDS with the same product name. | 0.980 |
| APA98301.1 | sufC | NS506_04253 | NS506_04251 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Belongs to the ABC transporter superfamily. Ycf16 family; Contains 1 ABC transporter domain. | 0.997 |
| APA98301.1 | sufD | NS506_04253 | NS506_04250 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Belongs to the UPF0051 (ycf24) family; overlaps another CDS with the same product name. | 0.985 |
| APA98301.1 | sufS | NS506_04253 | NS506_00357 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily; KEGG: sjp:SJA_C1-33940 cysteine desulfurase / selenocysteine lyase. | 0.964 |
| APA98301.1 | sufS-2 | NS506_04253 | NS506_04252 | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.997 |
| APA98302.1 | APA98301.1 | NS506_04254 | NS506_04253 | Hypothetical protein. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | 0.991 |
| APA98302.1 | APA98841.1 | NS506_04254 | NS506_04795 | Hypothetical protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine. Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters. Required for the maturation of all plastidic Fe-S proteins and, thus, essential for plant growth ; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: ncy:NOCYR_2674 cysteine desulfurase / selenocysteine lyase. | 0.686 |
| APA98302.1 | egtE | NS506_04254 | NS506_01657 | Hypothetical protein. | Cysteine desulfurase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily. | 0.583 |
| APA98302.1 | iscS | NS506_04254 | NS506_00837 | Hypothetical protein. | Cysteine desulfurase; Is essential for optimal growth; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: rha:RHA1_ro04117 cysteine desulfurase. | 0.562 |
| APA98302.1 | sufB | NS506_04254 | NS506_04249 | Hypothetical protein. | Belongs to the UPF0051 (ycf24) family; Contains 1 DOD-type homing endonuclease domain; overlaps another CDS with the same product name. | 0.947 |
| APA98302.1 | sufC | NS506_04254 | NS506_04251 | Hypothetical protein. | Belongs to the ABC transporter superfamily. Ycf16 family; Contains 1 ABC transporter domain. | 0.977 |
| APA98302.1 | sufD | NS506_04254 | NS506_04250 | Hypothetical protein. | Belongs to the UPF0051 (ycf24) family; overlaps another CDS with the same product name. | 0.936 |
| APA98302.1 | sufS | NS506_04254 | NS506_00357 | Hypothetical protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily; KEGG: sjp:SJA_C1-33940 cysteine desulfurase / selenocysteine lyase. | 0.638 |
| APA98302.1 | sufS-2 | NS506_04254 | NS506_04252 | Hypothetical protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.971 |
| APA98841.1 | APA98301.1 | NS506_04795 | NS506_04253 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine. Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters. Required for the maturation of all plastidic Fe-S proteins and, thus, essential for plant growth ; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: ncy:NOCYR_2674 cysteine desulfurase / selenocysteine lyase. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity); Belongs to the NifU family. | 0.975 |
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