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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98377.1Putative NAD(P)H nitroreductase; Belongs to the nitroreductase family. (326 aa)    
Predicted Functional Partners:
APA98378.1
Hypothetical protein.
  
  
 0.939
APA98376.1
Belongs to the universal stress protein A family.
 
  
 0.835
APA98362.1
Hypoxic response protein; Unlike some other CBS-domain containing proteins does not seem to bind AMP; Contains 2 CBS domains.
  
  
 0.737
APB00359.1
Hypothetical protein.
   
  
 0.731
APA98379.1
Belongs to the universal stress protein A family.
 
  
 0.722
APA98735.1
Putative zinc metalloprotease Rip3; Belongs to the peptidase M50B family; Contains 2 CBS domains; KEGG: met:M446_0694 stage IV sporulation protein FB; Metalloendopeptidases.
 
  
 0.715
APA98893.1
Hypothetical protein.
  
  
 0.692
APA98349.1
Uncharacterized protein; In the N-terminal sectio; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.690
APA97775.1
Uncharacterized protein.
  
  
 0.687
APA96423.1
Uncharacterized protein.
  
  
 0.673
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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